Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015899879.1_cds_XP_016449913.1_44415
CDS Infomation

[gene=LOC107774783] [db_xref=GeneID:107774783] [protein=auxin response factor 6-like] [protein_id=XP_016449913.1] [location=join(97696..97738,98737..98849,99396..99494,99602..99658,99751..99909,100013..100097,100231..100321,100751..100915,100997..101119,101249..101324,101657..101804,101931..103057,103513..103703,104433..104631)] [gbkey=CDS]
Sequence

ATGAGGCTTTCTTCTGCTGGTTCCAATCAGCAGTCTCCTGAAGGGGAGAATAAATGTTTG
AATTCTGAGCTTTGGCACGCATGCGCGGGACCTCTTGTTTCCCTACCAGCTGTTGGAAGC
AGAGTGGTGTATTTCCCCCAAGGGCATAGTGAGCAGGTTACTGCATCAACAAACAAGGAA
GCTGAGGCTCATATTCCGAATTACCCAAGCCTGGCCCCACAACTTATTTGCCAGCTTCAC
AATGTGACCATGCACGCTGATGTGGAGACTGATGAGGTTTACGCTCAAATGACCTTGCAA
CCTTTGAGCCCTGAAGAGCAAAAGGAGGCATCTTTCCTTCCTTTAGATTTGGGTACCCCG
AGTAAACAGCCAACAAATTACTTCTGTAAAACATTGACAGCAAGTGACACAAGTACTCAT
GGTGGATTTTCAGTACCTCGCCGTGCAGCAGAGAAAGTTTTTCCTCCATTGGACTTCTCT
CAGCAGCCTCCTGTACAAGAGTTGATCGCTAGGGATCTGCATGACAATGAGTGGAAATTT
AGACATATTTTCAGGGGTCAGCCGAAGAGGCATCTTCTTACAACTGGTTGGAGTGTGTTT
GTAAGTGCAAAAAGACTTGTTGCTGGTGATTCAATCATTTTCATCTGGAATGAGAAGAAT
CAATTATTTCTTGGTATTCGACGTGCCAATCGGTCCCAAACTGTGATGCCGTCTTCAGTT
TTATCAAGTGACAGCATGCATTTGGGTCTTTTGGCTGCTGCAGCTCATGCAGCAGCAACT
AATAGCAGATTCACCATTTTTTATAATCCGAGGTCTTGTCCTTCAGACTTTGTTGTACCT
CTTGCCAAGTATGTCAAAGCAGTGTATCATACTCGCATTTCTGTAGGCATGCGCTTCAGA
ATGTTATTTGAAACTGAAGAATCTAGTGTTCGTCGTTACATGGGCACTATAACTGGCATA
GGTGATTTGGATCCTGTTCGTTGGCCAAACTCACATTGGCGTTCAGTTAAGGTTGGCTGG
GACGAGTCTACAGCTGGGGAAAGGCAACCAAGAGTTTCCCTATGGGAAGTCGAACCTTTA
ACAACATTCCCTATGTATCCATCGCCATTTCCTCTGAGACTCAAGCGATCATGGCCTCCT
GGATTCCCGGCATTAAGTGGGATGAAGGATGATGACATGGTAATGAATCCTATGATGTGG
CTCCGTGATGTTGGAGATGGTGGAACCCAATCTATCAATTTTCAGGGAATTGGAGTCACA
CCTTGGATGCAACCCAGAATTGACGTCCCAATAGGTGGAATGCAAATGGATATTTATCAA
GCTATGGCTGCTGGTGCCCTTCAAGATTTGAGGTCTGTGGATCCCTCTAAACAGGCTCTC
ACTTCGCTTCTGCAACTTCAGCAATCCAATGGTGTCACCAACAACACTTCCGGACTACTA
TATCCACAGTTATTTCAACAGTCTCAAGGCCAAACAGCGTTTCTGCCGAGCATGGCACAG
GGCCAGTCCCAAGTGCAACCTGTATCGCAGCCTCATATTTTTCAGCAACAAATGCTGCAT
CAAAATTCATCCAACACTATCCATCAGCAGCAACAACAATCTCCTCAGGAGCAGCAGCCT
CCTCTGCAGCAACAGCAAGCAATTAGACAGCTGGACTCGAGCTCTCAATCACAACAGACA
TCATTGCAAGCATTCTGTTCTACGCAACAGGAAAGCTTCACTGACACAAATGTGAATCAT
TCCACCAACTCAATTGTTAATCCACTGCACAGCCTATCGGGTGCAGTTACCCGGGATGAA
CCATCCCAGCTTGTCAGTGTTCCTAGATCGAGCTCCTTACTATCTCCTACCGGATGGCCA
CCAAAGAGGGTGGCTGTCGATCCTGTTCTTCCTTCTGCATCTTCACAGCGTATGTCACCC
TACATTGATCAGTCGGGAACACCCAACAAAAATGTATCTCAAAATGCTCTTTCTTTGCCA
ACGTTCCCAGGTAGGGACTGCCCCGTAGGTCAAGAAGGGAACAATGATCCCCACAATCAT
CTTTTGTTTGGGTTCAATATAGATTCCCCATCTCTTATGCAGAGCGATATGCGAAGCCTT
AGGGGAGTTGTTAGCGATTGTGAGTCAACAAATGTGCCCTTTGCTTCTTCCAACTACCTA
AGTAATGCGGGCAATGATTTTTCTCAAAATCCAGTTATGGCACTCTCTGGTTGCATTAAT
GTACCAGGTTTCACACAGACTTCTGAAAATGCGGGACAAGAAAGCCCACATAACACCTTT
GTTAAGGTCTATAAATCAGGGTCCTTCGGAAGGTCATTAGACATCACCAAGTTTAGCAGC
TACCATGAGCTGCGAAGTGAGCTTGCACGGATGTTTGGCCTTGAAGGCTTACTGGAGGAT
CCTTTGAGATCAGGCTGGCAGCTTGTATTTGTTGACAGGGAGAATGATGTGCTTCTCCTC
GGTGACGATCCCTGGCCGGAGTTCGTCAACAGCGTATGGTGTATTAAAATACTCTCACCT
CACGACGTGCAGCAGATGGGAAGACAAGGTCTCGAGCTTTTGAACTCAGTATCCATGTCT
AGGTCATCAAATAATAGCTGTGATGACTTTGCAAATCGCTCGGAATCTAGGAATATGACC
TCTGGCATCATGTCTGTTGCTACTCTCGACTACTAG

Peptide Sequence

PEP ID

XP_016449913.1
PEP Infomation

PREDICTED: auxin response factor 6-like [Nicotiana tabacum]
Sequence

MRLSSAGSNQQSPEGENKCLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVTASTNKE
AEAHIPNYPSLAPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKEASFLPLDLGTP
SKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPVQELIARDLHDNEWKF
RHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSIIFIWNEKNQLFLGIRRANRSQTVMPSSV
LSSDSMHLGLLAAAAHAAATNSRFTIFYNPRSCPSDFVVPLAKYVKAVYHTRISVGMRFR
MLFETEESSVRRYMGTITGIGDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEVEPL
TTFPMYPSPFPLRLKRSWPPGFPALSGMKDDDMVMNPMMWLRDVGDGGTQSINFQGIGVT
PWMQPRIDVPIGGMQMDIYQAMAAGALQDLRSVDPSKQALTSLLQLQQSNGVTNNTSGLL
YPQLFQQSQGQTAFLPSMAQGQSQVQPVSQPHIFQQQMLHQNSSNTIHQQQQQSPQEQQP
PLQQQQAIRQLDSSSQSQQTSLQAFCSTQQESFTDTNVNHSTNSIVNPLHSLSGAVTRDE
PSQLVSVPRSSSLLSPTGWPPKRVAVDPVLPSASSQRMSPYIDQSGTPNKNVSQNALSLP
TFPGRDCPVGQEGNNDPHNHLLFGFNIDSPSLMQSDMRSLRGVVSDCESTNVPFASSNYL
SNAGNDFSQNPVMALSGCINVPGFTQTSENAGQESPHNTFVKVYKSGSFGRSLDITKFSS
YHELRSELARMFGLEGLLEDPLRSGWQLVFVDRENDVLLLGDDPWPEFVNSVWCIKILSP
HDVQQMGRQGLELLNSVSMSRSSNNSCDDFANRSESRNMTSGIMSVATLDY

Transcript Sequence

Gene sequence data has not been registered.